diff --git a/src/plugins/cppcheck/cppcheckmanualrundialog.cpp b/src/plugins/cppcheck/cppcheckmanualrundialog.cpp
index 35a057ccffd..f5d5f687581 100644
--- a/src/plugins/cppcheck/cppcheckmanualrundialog.cpp
+++ b/src/plugins/cppcheck/cppcheckmanualrundialog.cpp
@@ -52,7 +52,9 @@ ManualRunDialog::ManualRunDialog(const ProjectExplorer::Project *project)
         analyzeButton->setEnabled(m_model->hasCheckedFiles());
     });
 
-    auto optionsWidget = settings().layouter()().emerge();
+    m_manualRunSettings.readSettings();
+    m_manualRunSettings.setAutoApply(true);
+    auto optionsWidget = m_manualRunSettings.layouter()().emerge();
 
     auto layout = new QVBoxLayout(this);
     layout->addWidget(optionsWidget);
diff --git a/src/plugins/cppcheck/cppcheckmanualrundialog.h b/src/plugins/cppcheck/cppcheckmanualrundialog.h
index 76206578e34..fe5b920ee23 100644
--- a/src/plugins/cppcheck/cppcheckmanualrundialog.h
+++ b/src/plugins/cppcheck/cppcheckmanualrundialog.h
@@ -3,6 +3,8 @@
 
 #pragma once
 
+#include "cppchecksettings.h"
+
 #include <QDialog>
 
 namespace Utils {
@@ -25,8 +27,10 @@ public:
     Utils::FilePaths filePaths() const;
     QSize sizeHint() const override;
 
+    const CppcheckSettings &manualRunSettings() const { return m_manualRunSettings; }
 private:
     ProjectExplorer::SelectableFilesFromDirModel *m_model;
+    CppcheckSettings m_manualRunSettings;
 };
 
 } // Cppcheck::Internal
diff --git a/src/plugins/cppcheck/cppcheckplugin.cpp b/src/plugins/cppcheck/cppcheckplugin.cpp
index 30ee2c2d67c..5bc99e54efb 100644
--- a/src/plugins/cppcheck/cppcheckplugin.cpp
+++ b/src/plugins/cppcheck/cppcheckplugin.cpp
@@ -56,9 +56,9 @@ public:
 
 CppcheckPluginPrivate::CppcheckPluginPrivate()
 {
-    tool.updateOptions();
+    tool.updateOptions(settings());
     connect(&settings(), &AspectContainer::changed, this, [this] {
-        tool.updateOptions();
+        tool.updateOptions(settings());
         trigger.recheck();
     });
 
@@ -112,8 +112,6 @@ void CppcheckPluginPrivate::startManualRun()
     if (!project)
         return;
 
-    manualRunTool.updateOptions();
-
     ManualRunDialog dialog(project);
     if (dialog.exec() == ManualRunDialog::Rejected)
         return;
@@ -125,7 +123,7 @@ void CppcheckPluginPrivate::startManualRun()
         return;
 
     manualRunTool.setProject(project);
-    manualRunTool.updateOptions();
+    manualRunTool.updateOptions(dialog.manualRunSettings());
     manualRunTool.check(files);
     perspective.select();
 }
diff --git a/src/plugins/cppcheck/cppchecktool.cpp b/src/plugins/cppcheck/cppchecktool.cpp
index 85a17d92df4..e91e5a2ca05 100644
--- a/src/plugins/cppcheck/cppchecktool.cpp
+++ b/src/plugins/cppcheck/cppchecktool.cpp
@@ -39,10 +39,10 @@ CppcheckTool::CppcheckTool(CppcheckDiagnosticManager &manager, const Id &progres
 
 CppcheckTool::~CppcheckTool() = default;
 
-void CppcheckTool::updateOptions()
+void CppcheckTool::updateOptions(const CppcheckSettings &settings)
 {
     m_filters.clear();
-    for (const QString &pattern : settings().ignoredPatterns().split(',')) {
+    for (const QString &pattern : settings.ignoredPatterns().split(',')) {
         const QString trimmedPattern = pattern.trimmed();
         if (trimmedPattern.isEmpty())
             continue;
@@ -52,56 +52,54 @@ void CppcheckTool::updateOptions()
             m_filters.push_back(re);
     }
 
-    updateArguments();
+    updateArguments(settings);
 }
 
 void CppcheckTool::setProject(ProjectExplorer::Project *project)
 {
     m_project = project;
-    updateArguments();
+    updateArguments(settings());
 }
 
-void CppcheckTool::updateArguments()
+void CppcheckTool::updateArguments(const CppcheckSettings &settings)
 {
     if (!m_project)
         return;
 
     m_cachedAdditionalArguments.clear();
 
-    CppcheckSettings &s = settings();
-
     QStringList arguments;
-    if (!s.customArguments().isEmpty()) {
+    if (!settings.customArguments().isEmpty()) {
         Utils::MacroExpander *expander = Utils::globalMacroExpander();
-        const QString expanded = expander->expand(s.customArguments());
+        const QString expanded = expander->expand(settings.customArguments());
         arguments.push_back(expanded);
     }
 
-    if (s.warning())
+    if (settings.warning())
         arguments.push_back("--enable=warning");
-    if (s.style())
+    if (settings.style())
         arguments.push_back("--enable=style");
-    if (s.performance())
+    if (settings.performance())
         arguments.push_back("--enable=performance");
-    if (s.portability())
+    if (settings.portability())
         arguments.push_back("--enable=portability");
-    if (s.information())
+    if (settings.information())
         arguments.push_back("--enable=information");
-    if (s.unusedFunction())
+    if (settings.unusedFunction())
         arguments.push_back("--enable=unusedFunction");
-    if (s.missingInclude())
+    if (settings.missingInclude())
         arguments.push_back("--enable=missingInclude");
-    if (s.inconclusive())
+    if (settings.inconclusive())
         arguments.push_back("--inconclusive");
-    if (s.forceDefines())
+    if (settings.forceDefines())
         arguments.push_back("--force");
 
-    if (!s.unusedFunction() && !s.customArguments().contains("-j "))
+    if (!settings.unusedFunction() && !settings.customArguments().contains("-j "))
         arguments.push_back("-j " + QString::number(QThread::idealThreadCount()));
 
     arguments.push_back("--template=\"{file},{line},{severity},{id},{message}\"");
 
-    m_runner->reconfigure(s.binary.effectiveBinary(), arguments.join(' '));
+    m_runner->reconfigure(settings.binary.effectiveBinary(), arguments.join(' '));
 }
 
 QStringList CppcheckTool::additionalArguments(const CppEditor::ProjectPart &part) const
diff --git a/src/plugins/cppcheck/cppchecktool.h b/src/plugins/cppcheck/cppchecktool.h
index e8e61efaef9..cf36bb18525 100644
--- a/src/plugins/cppcheck/cppchecktool.h
+++ b/src/plugins/cppcheck/cppchecktool.h
@@ -24,6 +24,7 @@ namespace Cppcheck::Internal {
 
 class CppcheckRunner;
 class CppcheckDiagnosticManager;
+class CppcheckSettings;
 
 class CppcheckTool final : public QObject
 {
@@ -33,7 +34,7 @@ public:
     CppcheckTool(CppcheckDiagnosticManager &manager, const Utils::Id &progressId);
     ~CppcheckTool() override;
 
-    void updateOptions();
+    void updateOptions(const CppcheckSettings &settings);
     void setProject(ProjectExplorer::Project *project);
     void check(const Utils::FilePaths &files);
     void stop(const Utils::FilePaths &files);
@@ -45,7 +46,7 @@ public:
     void finishWithFail(const QString &exitMessage);
 
 private:
-    void updateArguments();
+    void updateArguments(const CppcheckSettings &settings);
     void addToQueue(const Utils::FilePaths &files, const CppEditor::ProjectPart &part);
     QStringList additionalArguments(const CppEditor::ProjectPart &part) const;